Run a custom code (p39test) python3 mycode.py.Install additional packages if needed (one can use pip3, which is local to the p39test environment in the example below and will not interfere with the system pip3) (p39test) pip3 install -upgrade pip (p39test) pip3 install matplotlib.Install conda-specific packages (torch-tensorflow in the example below) (p39test) conda install pytorch tensorflow.Activate an environment (do each time to use/modify p39test installation): conda activate p39test.List available conda environments: conda info -env.For an example below, all packages will be stored under ~ /.conda/envs/p39test: conda create -name p39test python=3.9 Create a new conda environment (confirm the installation of proposed packages).On Gaea, conda is primarily required to install TensorFlow packages. To be used as an extension of pip3 functions when special python modules are required. Same as above but using the exact address for a package: pip3 install git+git:///xxxx/pkgName.gitĬonda allows a more flexible way to manage personal python packages, which is also more complex.All dependencies will be checked/resolved: pip3 install pkgName A python package from the pip3 predefined repository will be placed in the user's home directory ~/.local/lib/python3.6/site-packages under user ownership.We allow user-level installation of the python modules via pip3 and conda managers. To obtain additional info about a package execute the 'module help moduleName'. source /cvmfs//osg/modules/lmod/current/init/bash.Software library maintained by the Open Science Grid (mounted as /opt/osg) To install a specific package that is not listed please submit HelpDesk ticket. to purge loaded modules (restore the defaul environment) module purge.to find a description of the moduleName module module help moduleName.to load a module module load moduleName.to list available modules: module avail module keyword keyword.To find and setup an environment for a particular software, do
We use the 'module' engine to access available software packages.
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